| Assessing the practice of biomedical ontology evaluation: Gaps and opportunities
M Amith, Z He, J Bian, JA Lossio-Ventura, C Tao Journal of biomedical informatics 80, 1-13 | 101 | 2018 |
| “Down the rabbit hole” of vaccine misinformation on YouTube: Network exposure study
L Tang, K Fujimoto, M Amith, R Cunningham, RA Costantini, F York, ... Journal of Medical Internet Research 23 (1), e23262 | 57 | 2021 |
| Early usability assessment of a conversational agent for HPV vaccination
M Amith, ZHU Anna, R Cunningham, LIN Rebecca, L Savas, S Laura, ... Studies in health technology and informatics 257, 17 | 31 | 2019 |
| Architecture and usability of OntoKeeper, an ontology evaluation tool
M Amith, F Manion, C Liang, M Harris, D Wang, Y He, C Tao BMC medical informatics and decision making 19 (4), 1-18 | 22 | 2019 |
| Representing vaccine misinformation using ontologies
M Amith, C Tao Journal of biomedical semantics 9, 1-13 | 19 | 2018 |
| Visualized Emotion Ontology: a model for representing visual cues of emotions
R Lin, MT Amith, C Liang, R Duan, Y Chen, C Tao BMC medical informatics and decision making 18, 101-113 | 19 | 2018 |
| Conceiving an application ontology to model patient human papillomavirus vaccine counseling for dialogue management
M Amith, K Roberts, C Tao BMC bioinformatics 20 (21), 1-16 | 18 | 2019 |
| Examining potential usability and health beliefs among young adults using a conversational agent for HPV vaccine counseling
M Amith, R Lin, R Cunningham, QL Wu, LS Savas, Y Gong, JA Boom, ... AMIA Summits on Translational Science Proceedings 2020, 43 | 16 | 2020 |
| Expressing biomedical ontologies in natural language for expert evaluation
M Amith, FJ Manion, MR Harris, Y Zhang, H Xu, C Tao Studies in health technology and informatics 245, 838 | 16 | 2017 |
| Friend of a Friend with Benefits ontology (FOAF+): extending a social network ontology for public health
M Amith, K Fujimoto, R Mauldin, C Tao BMC Medical Informatics and Decision Making 20 (10), 1-14 | 15 | 2020 |
| Using Pathfinder networks to discover alignment between expert and consumer conceptual knowledge from online vaccine content
M Amith, R Cunningham, LS Savas, J Boom, R Schvaneveldt, C Tao, ... Journal of biomedical informatics 74, 33-45 | 13 | 2017 |
| Towards
an ontology-driven framework to enable development of personalized
mHealth solutions for Cancer survivors’ engagement in healthy living
S Myneni, M Amith, Y Geng, C Tao Studies in health technology and informatics 216, 113 | 13 | 2015 |
| Optimization of an EHR mobile application using the UFuRT conceptual framework
M Amith, PG Loubser, J Chapman, KC Zoker, FERR Ferreira AMIA Annual Symposium Proceedings 2012, 209 | 13 | 2012 |
| Network modeling of PrEP uptake on referral networks and health venue utilization among young men who have sex with men
K Fujimoto, P Wang, CA Flash, LM Kuhns, Y Zhao, M Amith, JA Schneider AIDS and Behavior 23, 1698-1707 | 12 | 2019 |
| Modulated evaluation metrics for drug-based ontologies
M Amith, C Tao Journal of biomedical semantics 8, 1-8 | 12 | 2017 |
| Developing VISO: vaccine information statement ontology for patient education
M Amith, Y Gong, R Cunningham, J Boom, C Tao Journal of biomedical semantics 6 (1), 1-12 | 12 | 2015 |
| A Web Application Towards Semiotic-based Evaluation of Biomedical Ontologies
M Amith, C Tao Proceedings of International Workshop on Biomedical Data Mining, Modeling … | 12 | 2015 |
| Using
machine learning–based approaches for the detection and classification
of human papillomavirus vaccine misinformation: infodemiology study of
reddit discussions
J Du, S Preston, H Sun, R Shegog, R Cunningham, J Boom, L Savas, ... Journal of Medical Internet Research 23 (8), e26478 | 11 | 2021 |
| Towards an ontology-based medication conversational agent for PrEP and PEP
MT Amith, L Cui, K Roberts, C Tao Proceedings of the conference. Association for Computational Linguistics … | 10 | 2020 |
| Understanding information needs and barriers to accessing health information across all stages of pregnancy: Systematic review
Y Lu, LA Barrett, RZ Lin, M Amith, C Tao, Z He JMIR Pediatrics and Parenting 5 (1), e32235 | 9 | 2022 |
| OntoKeeper: Semiotic-driven ontology evaluation tool for biomedical ontologists
M Amith, F Manion, C Liang, M Harris, D Wang, Y He, C Tao 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM … | 9 | 2018 |
| Towards a HPV vaccine knowledgebase for patient education content
W Dennis, R Cunningham, B Julie, M Amith, TAO Cui Studies in health technology and informatics 225, 432 | 9 | 2016 |
| Conversational ontology operator: patient-centric vaccine dialogue management engine for spoken conversational agents
M Amith, RZ Lin, L Cui, D Wang, A Zhu, G Xiong, H Xu, K Roberts, C Tao BMC Medical Informatics and Decision Making 20 (4), 1-17 | 8 | 2020 |
| Mining hpv vaccine knowledge structures of young adults from reddit using distributional semantics and pathfinder networks
M Amith, T Cohen, R Cunningham, LS Savas, N Smith, P Cuccaro, ... Cancer Control 27 (1), 1073274819891442 | 8 | 2020 |
| Network overlap and knowledge of a partner’s HIV status among young men who have sex with men
M Imahashi, K Fujimoto, LM Kuhns, M Amith, JA Schneider Aids Care 31 (12), 1533-1539 | 7 | 2019 |
| Lightweight predicate extraction for patient-level cancer information and ontology development
M Amith, HY Song, Y Zhang, H Xu, C Tao BMC medical informatics and decision making 17 (2), 23-34 | 7 | 2017 |
| Recognizing software names in biomedical literature using machine learning
Q Wei, Y Zhang, M Amith, R Lin, J Lapeyrolerie, C Tao, H Xu Health informatics journal 26 (1), 21-33 | 6 | 2020 |
| Ontology
of Consumer Health Vocabulary: providing a formal and interoperable
semantic resource for linking lay language and medical terminology
M Amith, L Cui, K Roberts, H Xu, C Tao 2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM … | 6 | 2019 |
| Knowledge-based approach for named entity recognition in biomedical literature: a use case in biomedical software identification
M Amith, Y Zhang, H Xu, C Tao Advances in Artificial Intelligence: From Theory to Practice: 30th … | 6 | 2017 |
| Collective
avoidance of social and health venues and HIV racial inequities:
Network modeling of venue avoidance on venue affiliation, social
networks, and HIV risk
K Fujimoto, P Wang, DH Li, LM Kuhns, M Amith, JA Schneider Health Education & Behavior 47 (2), 202-212 | 5 | 2020 |
| Designing an ontology for emotion-driven visual representations
R Lin, MT Amith, C Liang, C Tao 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM … | 5 | 2017 |
| An ontology-powered dialogue engine for patient communication of vaccines
M Amith, R Lin, L Cui, D Wang, A Zhu, G Xiong, H Xu, K Roberts, C Tao CEUR workshop proceedings 2427, 24 | 4 | 2019 |
| NET-EXPO: A Gephi Plugin Towards Social Network Analysis of Network Exposure for Unipartite and Bipartite Graphs
M Amith, K Fujimoto, C Tao International Conference on Human-Computer Interaction, 3-12 | 4 | 2019 |
| The ontology of fast food facts: conceptualization of nutritional fast food data for consumers and semantic web applications
M Amith, C Onye, T Ledoux, G Xiong, C Tao BMC medical informatics and decision making 21 (7), 1-15 | 3 | 2021 |
| A prototype mobile virtual assistant for semantic-based vaccine information retrieval
M Amith, C Tao Smart Health: International Conference, ICSH 2014, Beijing, China, July 10 … | 3 | 2014 |
| Toward a standard formal semantic representation of the model card report
MT Amith, L Cui, D Zhi, K Roberts, X Jiang, F Li, E Yu, C Tao BMC bioinformatics 23 (6), 1-18 | 2 | 2022 |
| Patient-provider communication training models for interactive speech devices
P Ngantcha, M Amith, C Tao, K Roberts International Conference on Human-Computer Interaction, 250-268 | 2 | 2021 |
| Experimenting with a prototype interactive narrative game to improve knowledge and beliefs for the HPV vaccine
A Zhu, M Amith, L Tang, R Cunningham, A Xu, JA Boom, C Tao HCI International 2021-Late Breaking Papers: HCI Applications in Health … | 2 | 2021 |
| Expressing and executing informed consent permissions using SWRL: the all of us use case
M Amith, MR Harris, C Stansbury, K Ford, FJ Manion, C Tao AMIA Annual Symposium Proceedings 2021, 197 | 2 | 2021 |
| A health consumer ontology of fast food information
M Amith, J Wang, G Xiong, K Roberts, C Tao 2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM … | 2 | 2020 |
| VEO-Engine: Interfacing and Reasoning with an Emotion Ontology for Device Visual Expression
M Amith, R Lin, C Liang, Y Gong, C Tao HCI International 2018–Posters' Extended Abstracts: 20th International … | 2 | 2018 |
| An initial framework for an ontology-based mobile application for vaccine information retrieval and education
M Amith, C Tao CEUR Workshop Proceedings 1327, 81-83 | 2 | 2014 |
| Community-clinic linkages for promoting HIV prevention: organizational networks for PrEP client referrals and collaborations
RL Mauldin, TA Rawwad, M Amith, LM Kuhns, JA Schneider, K Fujimoto AIDS care 34 (3), 340-348 | 1 | 2022 |
| Systematic Design of Drug Repurposing-Oriented Alzheimer’s Disease Ontology
F Li, M Wang, HA Pham, Y Xiang, C Tao, J Du, G Rao 2019 IEEE International Conference on Healthcare Informatics (ICHI), 1-5 | 1 | 2019 |
| Ontology-based dialogue systems for improved patient HPV vaccine knowledge and perception
M Amith CEUR Workshop Proceedings 1733, 9-16 | 1 | 2016 |
| DEVO: an ontology to assist with dermoscopic feature standardization
X Zhang, RZ Lin, M Amith, C Wang, J Light, J Strickley, C Tao BMC Medical Informatics and Decision Making 23 (1), 1-14 |
| 2023 |
| Evaluating Domain-Independent Small Talk Conversations to Improve Clinical Communication Interaction for Human and Machine
C Aguilar, M Amith, L Tang, J Hamilton, LS Savas, D Rhee, T Khan, C Tao International Conference on Human-Computer Interaction, 330-343 |
| 2023 |
| Systematic design and data-driven evaluation of social determinants of health ontology (SDoHO)
Y Dang, F Li, X Hu, VK Keloth, M Zhang, S Fu, MF Amith, JW Fan, J Du, ... Journal of the American Medical Informatics Association, ocad096 |
| 2023 |
| Application
of an ontology for model cards to generate computable artifacts for
linking machine learning information from biomedical research
M Amith, L Cui, K Roberts, C Tao Companion Proceedings of the ACM Web Conference 2023, 820-825 |
| 2023 |
| Exploratory
Ontology-based Approach For Interlinking Open Government Data of
Hospital Services in Developing Nations: An Indonesian Use Case
I Ali, M Amith |
| 2023 |
| CRENO: An ontology to model concepts relating to culture, race, ethnicity, and nationality for health data
E Nguyen, M Amith, A Nordberg, L Tang, MR Harris, C Tao AMIA Summits on Translational Science Proceedings 2023, 398 |
| 2023 |
| Abstract
of Distinction. Community-Clinic Linkages for Promoting HIV Prevention:
Organizational Networks for PrEP Client Referrals and Collaborations
T Al Rawwad, RL Mauldin, M Amith, L Kuhns, J Schneider, K Fujimoto Society for Prevention Research 30th Annual Meeting |
| 2022 |
| Dental EHR-infused Persona Ontologies to Enrich Dental Dialogue Interaction of Agents
P Ngantcha, M Amith, K Roberts, JA Valenza, M Walji, C Tao 2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM … |
| 2021 |
| Developing Ontologies to Standardize Descriptions of Visual and Dermoscopic Elements
RZ Lin, MT Amith, X Zhang, C Wang, J Light, J Strickley, C Tao 2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM … |
| 2021 |
| An Interactive Game for Changing Youth Behavior Regarding E-cigarettes
A Xu, M Amith, J Li, L Tang, C Tao HCI International 2020-Posters: 22nd International Conference, HCII 2020 … |
| 2020 |
| From Scoping Review to Metadata: An Evidence-Based Approach to Identifying Informed Consent Metadata for Biorepositories.
MR Harris, FJ Manion, H Song, Y He, MF Amith, C Tao AMIA |
| 2017 |
| Development of DataMed, a Data Discovery Index Prototype by bioCADDIE: Laying the Groundwork for Biomedical Data Discovery.
H Xu, JS Grethe, X Chen, R Liu, E Soysal, AE Gururaj, Y Li, IB Özyurt, ... AMIA |
| 2016 |
| A Scalable Dataset Indexing Infrastructure for the bioCADDIE Data Discovery System.
JS Grethe, IB Özyurt, H Xu, X Chen, R Liu, E Soysal, AE Gururaj, HE Kim, ... AMIA |
| 2016 |
| Software Design, a 2011 Primer
SA White, M Amith The ACET Journal of Computer Education and Research 7 |